Saturday, August 7, 2021

Mathematicians Solve Set Theory Problem

A pair of researchers has shown that trying to classify groups of numbers called “torsion-free abelian groups” is as hard as it can possibly be.

It is an exceptional problem for descriptive set theory.  See the link to this Quanta magazine article:

https://www.quantamagazine.org/mathematicians-solve-decades-old-classification-problem-20210805/

Friday, August 6, 2021

Uncrackable Codes from Invisible Ink and A.I.

From:  American Chemical Society

May 5, 2021 -- Coded messages in invisible ink sound like something only found in espionage books, but in real life, they can have important security purposes. Yet, they can be cracked if their encryption is predictable. Now, researchers reporting in ACS Applied Materials & Interfaces have printed complexly encoded data with normal ink and a carbon nanoparticle-based invisible ink, requiring both UV light and a computer that has been taught the code to reveal the correct messages.

Even as electronic records advance, paper is still a common way to preserve data. Invisible ink can hide classified economic, commercial or military information from prying eyes, but many popular inks contain toxic compounds or can be seen with predictable methods, such as light, heat or chemicals. Carbon nanoparticles, which have low toxicity, can be essentially invisible under ambient lighting but can create vibrant images when exposed to ultraviolet (UV) light -- a modern take on invisible ink. In addition, advances in artificial intelligence (AI) models -- made by networks of processing algorithms that learn how to handle complex information -- can ensure that messages are only decipherable on properly trained computers. So, Weiwei Zhao, Kang Li, Jie Xu and colleagues wanted to train an AI model to identify and decrypt symbols printed in a fluorescent carbon nanoparticle ink, revealing hidden messages when exposed to UV light.

The researchers made carbon nanoparticles from citric acid and cysteine, which they diluted with water to create an invisible ink that appeared blue when exposed to UV light. The team loaded the solution into an ink cartridge and printed a series of simple symbols onto paper with an inkjet printer. Then, they taught an AI model, composed of multiple algorithms, to recognize symbols illuminated by UV light and decode them using a special codebook. Finally, they tested the AI model's ability to decode messages printed using a combination of both regular red ink and the UV fluorescent ink. With 100% accuracy, the AI model read the regular ink symbols as "STOP," but when a UV light was shown on the writing, the invisible ink illustrated the desired message "BEGIN." Because these algorithms can notice minute modifications in symbols, this approach has the potential to encrypt messages securely using hundreds of different unpredictable symbols, the researchers say.

      https://www.sciencedaily.com/releases/2021/05/210505111356.htm

Thursday, August 5, 2021

The Intense Atmospheric Heating of Jupiter

New research published in Nature has revealed the solution to Jupiter’s ‘energy crisis’, which has puzzled astronomers for decades.

From:  University of Leicester

August 4, 2021 -- Space scientists at the University of Leicester worked with colleagues from the Japanese Space Agency (JAXA), Boston University, NASA’s Goddard Space Flight Center and the National Institute of Information and Communications Technology (NICT) to reveal the mechanism behind Jupiter’s atmospheric heating.

Now, using data from the Keck Observatory in Hawai’i, astronomers have created the most-detailed yet global map of the gas giant’s upper atmosphere, confirming for the first time that Jupiter’s powerful aurorae are responsible for delivering planet-wide heating.

Dr James O’Donoghue is a researcher at JAXA and completed his PhD at Leicester, and is lead author for the research paper.

He said: “We first began trying to create a global heat map of Jupiter’s uppermost atmosphere at the University of Leicester. The signal was not bright enough to reveal anything outside of Jupiter’s polar regions at the time, but with the lessons learned from that work we managed to secure time on one of the largest, most competitive telescopes on Earth some years later.

“Using the Keck telescope we produced temperature maps of extraordinary detail. We found that temperatures start very high within the aurora, as expected from previous work, but now we could observe that Jupiter’s aurora, despite taking up less than 10% of the area of the planet, appear to be heating the whole thing.

“This research started in Leicester and carried on at Boston University and NASA before ending at JAXA in Japan. Collaborators from each continent working together made this study successful, combined with data from NASA’s Juno spacecraft in orbit around Jupiter and JAXA’s Hisaki spacecraft, an observatory in space.”

Dr Tom Stallard and Dr Henrik Melin are both part of the School of Physics and Astronomy at the University of Leicester. Dr Stallard added: “There has been a very long-standing puzzle in the thin atmosphere at the top of every Giant Planet within our solar system.

“With every Jupiter space mission, along with ground-based observations, over the past 50 years, we have consistently measured the equatorial temperatures as being much too hot.

“This ‘energy crisis’ has been a long standing issue – do the models fail to properly model how heat flows from the aurora, or is there some other unknown heat source near the equator?

“This paper describes how we have mapped this region in unprecedented detail and have shown that, at Jupiter, the equatorial heating is directly associated with auroral heating.”

Aurorae occur when charged particles are caught in a planet’s magnetic field. These spiral along the field lines towards the planet’s magnetic poles, striking atoms and molecules in the atmosphere to release light and energy.

On Earth, this leads to the characteristic light show that forms the Aurora Borealis and Australis. At Jupiter, the material spewing from its volcanic moon, Io, leads to the most powerful aurora in the Solar System and enormous heating in the polar regions of the planet.

Although the Jovian aurorae have long been a prime candidate for heating the planet’s atmosphere, observations have previously been unable to confirm or deny this until now.

Previous maps of the upper atmospheric temperature were formed using images consisting of only several pixels. This is not enough resolution to see how the temperature might be changed across the planet, providing few clues as to the origin of the extra heat.

Researchers created five maps of the atmospheric temperature at different spatial resolutions, with the highest resolution map showing an average temperature measurement for squares two degrees longitude ‘high’ by two degrees latitude ‘wide’.

The team scoured more than 10,000 individual data points, only mapping points with an uncertainty of less than five per cent.

Models of the atmospheres of gas giants suggest that they work like a giant refrigerator, with heat energy drawn from the equator towards the pole, and deposited in the lower atmosphere in these pole regions.

These new findings suggest that fast-changing aurorae may drive waves of energy against this poleward flow, allowing heat to reach the equator.

Observations also showed a region of localised heating in the sub-auroral region that could be interpreted as a limited wave of heat propagating equatorward, which could be interpreted as evidence of the process driving heat transfer.

Planetary research at the University of Leicester spans the breadth of Jovian system, from the planet’s magnetosphere and atmosphere, out to its diverse collection of satellites.

Leicester researchers are members of the Juno mission made up of a global team astronomers observing the giant planet, and are leading Jupiter observations from the forthcoming James Webb Space Telescope. Leicester also plays a leading role in science and instrumentation on the European Space Agency (ESA)’s Jupiter Icy Moons Explorer (JUICE), due for launch in 2022.

‘Global upper-atmospheric heating on Jupiter by the polar aurorae’ is available in Nature.

               https://le.ac.uk/news/2021/august/jupiter-energy-crisis

Wednesday, August 4, 2021

Giraffes Are a Socially Complex Species

Scientists at the University of Bristol have discovered evidence that giraffes are a highly socially complex species

From:  University of Bristol

August 3, 2021 -- Traditionally, giraffes were thought to have little or no social structure, and only fleeting, weak relationships. However in the last ten years, research has shown that giraffe social organisation is much more advanced than once thought.

In a paper published today in the journal Mammal ReviewZoe Muller, of Bristol’s School of Biological Sciences, has demonstrated that giraffes spend up to 30% of their lives in a post-reproductive state.  This is comparable to other species with highly complex social structures and cooperative care, such as elephants and killer-whales which spend 23% and 35% of their lives in a post-reproductive state respectively. In these species, it has been demonstrated that the presence of post-menopausal females offers survival benefits for related offspring. In mammals - and –ncluding humans - this is known as the ‘Grandmother hypothesis’ which suggests that females live long past menopause so that they can help raise successive generations of offspring, thereby ensuring the preservation of their genes. Researchers propose that the presence of post-reproductive adult female giraffes could also function in the same way, and supports the author’s assertion that  giraffes are likely to engage in cooperative parenting, along matrilines, and contribute to the shared parental care of related kin. 

Zoe said: “It is baffling to me that such a large, iconic and charismatic African species has been understudied for so long. This paper collates all the evidence to suggest that giraffes are actually a highly complex social species, with intricate and high-functioning social systems, potentially comparable to elephants, cetaceans and chimpanzees.

“I hope that this study draws a line in the sand, from which point forwards, giraffes will be regarded as intelligent, group-living mammals which have evolved highly successful and complex societies, which have facilitated their survival in tough, predator-filled ecosystems.” 

For scientists to recognise giraffes as a socially complex species, Zoe has suggested eight key areas for future research, including the need to understand the role that older, post-reproductive adults play in society and what fitness benefits they bring for group survival.

Zoe added: “Recognising that giraffes have a complex cooperative social system and live in matrilineal societies will further our understanding of their behavioural ecology and conservation needs.

“Conservation measures will be more successful if we have an accurate understanding of the species’ behavioural ecology. If we view giraffes as a highly socially complex species, this also raises their 'status' towards being a more complex and intelligent mammal that is increasingly worthy of protection.”

Paper:

‘A review of the social behaviour of the giraffe Giraffa camelopardalis: a misunderstood but socially complex species’ in Mammal Review by Zoe Muller and Professor Stephen Harris.

       http://www.bristol.ac.uk/news/2021/august/giraffes-socially-complex.html

Tuesday, August 3, 2021

Weird Metallic Star Races Away from Milky Way

Boston University astronomers analyzed light data from a piece of supernova shrapnel—a star called LP 40−365—to gain clues about where it came from

From:  Boston University

August 2, 2021 -- About 2,000 light-years away from Earth, there is a star catapulting toward the edge of the Milky Way. This particular star, known as LP 40−365, is one of a unique breed of fast-moving stars—remnant pieces of massive white dwarf stars—that have survived in chunks after a gigantic stellar explosion. 

“This star is moving so fast that it’s almost certainly leaving the galaxy…[it’s] moving almost two million miles an hour,” says JJ Hermes, Boston University College of Arts & Sciences assistant professor of astronomy. But why is this flying object speeding out of the Milky Way? Because it’s a piece of shrapnel from a past explosion—a cosmic event known as a supernova—that’s still being propelled forward. 

“To have gone through partial detonation and still survive is very cool and unique, and it’s only in the last few years that we’ve started to think this kind of star could exist,” says Odelia Putterman, a former BU student who has worked in Hermes’ lab.

In  a new paper published in The Astrophysical Journal Letters, Hermes and Putterman uncover new observations about this leftover “star shrapnel” that gives insight to other stars with similar catastrophic pasts. 

Putterman and Hermes analyzed data from NASA’s Hubble Space Telescope and Transiting Exoplanet Survey Satellite (TESS), which surveys the sky and collects light information on stars near and far. By looking at various kinds of light data from both telescopes, the researchers and their collaborators found that LP 40−365 is not only being hurled out of the galaxy, but based on the brightness patterns in the data, is also rotating on its way out. 

“The star is basically being slingshotted from the explosion, and we’re [observing] its rotation on its way out,” says Putterman, who is second author on the paper. 

“We dug a little deeper to figure out why that star [was repeatedly] getting brighter and fainter, and the simplest explanation is that we’re seeing something at [its] surface rotate in and out of view every nine hours,” suggesting its rotation rate, Hermes says. All stars rotate—even our sun slowly rotates on its axis every 27 days. But for a star fragment that’s survived a supernova, nine hours is considered relatively slow. 

Supernovas occur when a white dwarf gets too massive to support itself, eventually triggering a cosmic detonation of energy. Finding the rotation rate of a star like LP 40−365 after a supernova can lend clues into the original two-star system it came from. It’s common in the universe for stars to come in close pairs, including white dwarfs, which are highly dense stars that form toward the end of a star’s life. If one white dwarf gives too much mass to the other, the star being dumped on can self-destruct, resulting in a supernova. Supernovas are commonplace in the galaxy and can happen in many different ways, according to the researchers, but they are usually very hard to see. This makes it hard to know which star did the imploding and which star dumped too much mass onto its star partner. 

Based on LP 40−365’s relatively slow rotation rate, Hermes and Putterman feel more confident that it is shrapnel from the star that self-destructed after being fed too much mass by its partner, when they were once orbiting each other at high speed. Because the stars were orbiting each other so quickly and closely, the explosion slingshotted both stars, and now we only see LP 40–365.

“This [paper] adds one more layer of knowledge into what role these stars played when the supernova occurred,” and what can happen after the explosion, Putterman says. “By understanding what’s happening with this particular star, we can start to understand what’s happening with many other similar stars that came from a similar situation.” 

“These are very weird stars,” Hermes says. Stars like LP 40–365 are not only some of the fastest stars known to astronomers, but also the most metal-rich stars ever detected. Stars like our sun are composed of helium and hydrogen, but a star that has survived a supernova is primarily composed of metal material, because “what we’re seeing are the by-products of violent nuclear reactions that happen when a star blows itself up,” Hermes says, making star shrapnel like this especially fascinating to study.

          https://www.eurekalert.org/news-releases/924183

Monday, August 2, 2021

Can Solar Powered Microbes Feed the World?

International research team shows that protein from microbes uses a fraction of the resources of conventional farming

From:  Georg-August-Universitat Gottingen

July 30, 2021 -- Microbes have played a key role in our food and drinks – from cheese to beer – for millennia but their impact on our nutrition may soon become even more important. The world is facing growing food challenges as the human population continues to increase alongside its demand for resource intensive animal products. If these needs are to be met solely by conventional agriculture, the environmental cost will be huge. An international research team led by a Göttingen University alumnus has now shown that using solar-panels to produce microbial protein – which is rich not just in proteins but also in other nutrients – is more sustainable, efficient and environmentally friendly than growing conventional crops. This method uses solar energy, land, nutrients, and carbon dioxide from the air. Their research was published in PNAS.

Using computer simulations drawing directly from laboratory results, the researchers modelled large-scale microbial food production facilities, which use solar energy, air, water, and nutrients to grow microbes. The protein-rich biomass is harvested and processed, and the resulting powder can be used as feed for animals, or as food for people. The study carried out an analysis of the energy requirements for each step, from the very start to the end product, taking into account: electricity generation (from solar panels), electrochemical production of energy-rich substrate for the microbes, microbe cultivation, harvesting, and processing the protein-rich biomass. Several types of microbes and growth strategies were compared in order to identify the most efficient.

The study found that for each kilo of protein produced, solar-powered microbes require only 10% of the land area compared to even the most efficient plant crop – soybean. The study calculated that even in northern climates with less sunshine, the yields of solar-powered microbial foods could far outproduce staple crops, while minimizing water and fertilizer use. Importantly, this production could also be located in regions not suitable for agriculture, such as deserts.

In previous research, the protein from these types of microbes has shown beneficial effects when fed to livestock and is already produced at large scale in the EU. “We expect that microbial protein will also be beneficial as a supplement to our diets, since it provides a high-quality protein source composed of all essential amino acids, as well as vitamins and minerals,” explains first author Dorian Leger, who carried out the work in the MPI of Molecular Plant Physiology while studying at the University of Göttingen, along with colleagues from Italy and Israel. “This technology has the potential to support food production while preventing damage to the environment. Current farming methods contribute to polluted ecosystems and depleted water reserves worldwide.”

At the moment, 30-40% of the Earth’s land is used for farming, yet one in ten people are undernourished. Leger says, “Integrating the cultivation of nutrient-rich microbes with renewable energy systems, such as solar panels, has the potential to produce more food with less resources. This could free up vast amounts of agricultural land, and, in addition, prevent the further destruction of natural ecosystems, thereby making a valuable contribution to conservation and sustainability whilst promoting food availability globally.”

             https://www.uni-goettingen.de/en/3240.html?id=6354

Sunday, August 1, 2021

Junk DNA May Affect Aging or Cancer

Researchers have recently identified a DNA region known as VNTR2-1 that appears to drive the activity of the telomerase gene, which has been shown to prevent aging in certain types of cells. 

From:  Washington State University

July 23, 2021 -- Knowing how the telomerase gene is regulated and activated and why it is only active in certain cell types could someday be the key to understanding how humans age and how to stop the spread of cancer.

A research team headed by Jiyue Zhu, a professor in the College of Pharmacy and Pharmaceutical Sciences, recently identified a DNA region known as VNTR2-1 that appears to drive the activity of the telomerase gene, which has been shown to prevent aging in certain types of cells. The study was published in the journal Proceedings of the National Academy of Sciences (PNAS).

The telomerase gene controls the activity of the telomerase enzyme, which helps produce telomeres, the caps at the end of each strand of DNA that protect the chromosomes within our cells. In normal cells, the length of telomeres gets a little bit shorter every time cells duplicate their DNA before they divide. When telomeres get too short, cells can no longer reproduce, causing them to age and die. However, in certain cell types -- including reproductive cells and cancer cells -- the activity of the telomerase gene ensures that telomeres are reset to the same length when DNA is copied. This is essentially what restarts the aging clock in new offspring but is also the reason why cancer cells can continue to multiply and form tumors.

Knowing how the telomerase gene is regulated and activated and why it is only active in certain types of cells could someday be the key to understanding how humans age, as well as how to stop the spread of cancer. That is why Zhu has focused the past 20 years of his career as a scientist solely on the study of this gene.

Zhu said that his team's latest finding that VNTR2-1 helps to drive the activity of the telomerase gene is especially notable because of the type of DNA sequence it represents.

"Almost 50% of our genome consists of repetitive DNA that does not code for protein," Zhu said. "These DNA sequences tend to be considered as 'junk DNA' or dark matters in our genome, and they are difficult to study. Our study describes that one of those units actually has a function in that it enhances the activity of the telomerase gene."

Their finding is based on a series of experiments that found that deleting the DNA sequence from cancer cells -- both in a human cell line and in mice -- caused telomeres to shorten, cells to age, and tumors to stop growing. Subsequently, they conducted a study that looked at the length of the sequence in DNA samples taken from Caucasian and African American centenarians and control participants in the Georgia Centenarian Study, a study that followed a group of people aged 100 or above between 1988 and 2008. The researchers found that the length of the sequence ranged from as short as 53 repeats -- or copies -- of the DNA to as long as 160 repeats.

"It varies a lot, and our study actually shows that the telomerase gene is more active in people with a longer sequence," Zhu said.

Since very short sequences were found only in African American participants, they looked more closely at that group and found that there were relatively few centenarians with a short VNTR2-1 sequence as compared to control participants. However, Zhu said it was worth noting that having a shorter sequence does not necessarily mean your lifespan will be shorter, because it means the telomerase gene is less active and your telomere length may be shorter, which could make you less likely to develop cancer.

"Our findings are telling us that this VNTR2-1 sequence contributes to the genetic diversity of how we age and how we get cancer," Zhu said. "We know that oncogenes -- or cancer genes -- and tumor suppressor genes don't account for all the reasons why we get cancer. Our research shows that the picture is a lot more complicated than a mutation of an oncogene and makes a strong case for expanding our research to look more closely at this so-called junk DNA."

Zhu noted that since African Americans have been in the United States for generations, many of them have Caucasian ancestors from whom they may have inherited some of this sequence. So as a next step, he and his team hope to be able to study the sequence in an African population.

In addition to Zhu, authors on the paper include co-first authors Tao Xu and De Cheng and others at Washington State University, as well as their collaborators at Northeast Forestry University in China; Pennsylvania State University; and North Carolina State University.

Funding for this study came from the National Institutes of Health's National Institute of General Medical Sciences, the Melanoma Research Alliance, and the Health Sciences and Services Authority of Spokane County.

          https://www.sciencedaily.com/releases/2021/07/210723105258.htm